Transcription Factor Browser

Detailed locus information, expression profile, gene disruption strategy, and phenotype assay data.

Detailed Locus Information for CNAG_04837T0
Species Cryptococcus neoformans var. grubii H99
Gene Annotation hypothetical protein
Gene Symbol MLN1
TF Family Name bHLH Classification based on Fungal Transcription Factor DB
KEGG Linkout  KEGG::CNJ02620 
Genome Browser JBrowse link goes here. Sequence information also available from JBrowse.
Functional Annotation No functional annotation available.
Amino Acid Sequence MSTAKVEGFSIPGNSHMSSRPNIHRPFSDGSMTVDTDLLASLMSGGSPHQSADRGQFNMAHSPFSFSQSLPVRHHSFDYSLPSPLSTSINIAGHMRNNISGGTGVNSGGVFNTVKFGNEHPEPPVSLPPAIDAIEQGSHQRSRSQSSAHSVGKAPSSRSRQARKSMTDVRPPRSSLQRGRSQGPTRPMGLGMSLDTHVEGEMTDSISPPDFGANGAFGLAIAAGRDSFNNDTSSWASGSVPSMVPGSLGSFDTDEVLVDSPITPVKPLLQLSDENYKKQRRRECHNLVEKRRREHINAKIEELGTLLPEKYNQIDEPAEEEDEDGKTTAKKKKNKRGGNTSAKSQKDAAHCKGRILSQSVSYIRDLKQITETQASRISQLEQLLMNLGVNTADENVNVNQGFPQQQPLFWLNNNGLNNFPDSDERNLQAMRPSPEPERSFSFDVVNTQPWSASHDSGGSPNPVNGMHAQENKDMFIPFQPSPTSTNSSHPPNMSDFRRASHSGSSDMEMDPLSPLGGGEERGRDKLREGAMRQDSQIELQMGMSGLFNTKF
Expression Data
Notation Condition Normalized Raw Expression
A YPD 30°C, concentration: 2x 10^8 cells/ml 122
B YPD 30°C, concentration: 5x10^7 cells/ml 23
C YPD 30°C, fluconazole treatment, concentration: 5x10^7 cells/ml 43
D YPD 30°C, SDS 0.01% treatment, concentration: 5x10^7 cells/ml 48
E YPD 37°C, concentration: 5x10^7 cells/ml 38
F YP+galactose 30°C, concentration: 2x10^8 cells/ml 572
Gene Disruption Strategy
Gene disruption strategy for CNAG_04837T0
Primer Name Description Primer Sequence
L1 5' flanking region primer 1 TGAAACAGTGAATCAGGCAC
L2 5' flanking region primer 2 GCTCACTGGCCGTCGTTTTACTCAGTGTCAACGGTCATTG
PO1 Southern blot probe primer 1 TGTCCCCATCAACTCTACAAC
PO2 Southern blot probe primer 2 CTTCTGCTTTCACCATTAGC
R1 3' flanking region primer 1 CATGGTCATAGCTGTTTCCTGGAAAGGGGTAGGGATAAGTTG
R2 3' flanking region primer 2 ACTGAACGACAAGAGACGAC
SO1 diagnostic screening primer, pairing with B79 TAAGAGAAAAGGGGCTGC
Phenotype Assays
Growth
Growth phenotype for CNAG_04837T0
Mating Data
Mating phenotype for CNAG_04837T0
Virulence Factor Production
Capsule
Capsule phenotype for CNAG_04837T0
Urease
Urease phenotype for CNAG_04837T0
Melanin
Melanin phenotype for CNAG_04837T0
Stress Response and Adaptation
Osmotic Stress
Osmotic stress phenotype for CNAG_04837T0
Oxidative Stress
Oxidative stress phenotype for CNAG_04837T0
Heavy Metal Stress
Heavy metal stress phenotype for CNAG_04837T0
Cell Wall Stress
Cell wall stress phenotype for CNAG_04837T0
ER Stress
ER stress phenotype for CNAG_04837T0
Genotoxic Stress
Genotoxic stress phenotype for CNAG_04837T0
Antifungal Drug Susceptibility
Antifungal drug susceptibility for CNAG_04837T0
Virulence Data by the Insect Host Model (Galleria mellonella)
Galleria mellonella virulence data for CNAG_04837T0
Lung Infectivity Data by the Signature-tag Mutagenesis-based Murine Host Model
STM murine host model data for CNAG_04837T0