Transcription Factor Browser

Detailed locus information, expression profile, gene disruption strategy, and phenotype assay data.

Detailed Locus Information for CNAG_06223T0
Species Cryptococcus neoformans var. grubii H99
Gene Annotation E3 SUMO-protein ligase PIAS1
Gene Symbol MIZ1
TF Family Name Zinc finger, MIZ-type Classification based on Fungal Transcription Factor DB
KEGG Linkout  KEGG::CNM02250 
Genome Browser JBrowse link goes here. Sequence information also available from JBrowse.
Functional Annotation
KEGG Annotation
KO AccessionE-valueScore
K04706 KEGG 5.6e-73 245.1
Amino Acid Sequence MLRHTGTYRAPVRKTDWSGFDEFLRLWIPSHTVPQLRSFASALVTYGRRDPFMRSGDRKADVIQKIQEAFMALKARMDLDAYVEARYHCEVAVGGGWDPFPRTNTTILIPPAPPIRTHPSVQPPPPPTFGGVPRWSSGVNSSSSGLNGYRSTPGSGSNSVGYGNTSAHAAPSTPSHGPQHALQDWKINPLWKPLRAITSMETLPDISANESHSTYRTKRTQFVLPNDVIEKLKASRESPQTPPHYSLRLFCTSSDHYRPTSVHARHIPPSTNIPIEYPGNPEVSIDGTILPFKEKGLRGKAGSAPPFDLDKPINVAVGGRVALVPGRLIGVNVGHRGPTTGKNKSQSKRFFFQIVLAEMTTKEELLEKLNKLEPTKAEDAIEQLRKKQEDDDDIVAGTASMSLKDPLSYMRMIRPIRSSKCSHIQCFDATWWIESNAVHPQWLCPHCSKELRFDDLIVDGYVMDILKAVPDTVDDVILEPTGEWHTEDNKYGTASWLASHVKPSSATAAVSTPVASSALASFSSEIETKPSVCDMNDTSSGDGANRGGAGLKRKVVQVIDSDDEGDGTPAKSSVPPAGRITGLGSSSSVGGSRTGASTPIIDLTLSDSDDETDEETGSATSSRGPPAPIQVPRTSIAASAIVSPKRPVSAAWTNFHSSRETTSNVIRSPSTSSWPGLSTAGIGGVSGRSSPLSNINGQTSASASGSATTSHLQPPSDQYPPISPPHISGPPPQTTVTSPRIAGLPPPSHIFPSSPSPASIAPAAPPPHVPPVRAFSRPGWVNPLGPSSSSEISSSTYASATPP
Expression Data
Notation Condition Normalized Raw Expression
A YPD 30°C, concentration: 2x 10^8 cells/ml 2232
B YPD 30°C, concentration: 5x10^7 cells/ml 2262
C YPD 30°C, fluconazole treatment, concentration: 5x10^7 cells/ml 2357
D YPD 30°C, SDS 0.01% treatment, concentration: 5x10^7 cells/ml 2127
E YPD 37°C, concentration: 5x10^7 cells/ml 2382
F YP+galactose 30°C, concentration: 2x10^8 cells/ml 2296
Gene Disruption Strategy
Gene disruption strategy for CNAG_06223T0
Primer Name Description Primer Sequence
L1 5' flanking region primer 1 GGATGAAGGGGAAGACTTG
L2 5' flanking region primer 2 TCACTGGCCGTCGTTTTACCTTCCGTTCAAAATCGTCG
PO Southern blot probe primer AGAGCAGAAGCAAATGACC
R1 3' flanking region primer 1 CATGGTCATAGCTGTTTCCTGGTCTACCACCACCATCACAC
R2 3' flanking region primer 2 GCCGTCCATTCATACATCTG
SO diagnostic screening primer, pairing with B79 GGTGTCAATAGTTGGGTGG
Phenotype Assays
Growth
Growth phenotype for CNAG_06223T0
Mating Data
Mating phenotype for CNAG_06223T0
Virulence Factor Production
Capsule
Capsule phenotype for CNAG_06223T0
Urease
Urease phenotype for CNAG_06223T0
Melanin
Melanin phenotype for CNAG_06223T0
Stress Response and Adaptation
Osmotic Stress
Osmotic stress phenotype for CNAG_06223T0
Oxidative Stress
Oxidative stress phenotype for CNAG_06223T0
Heavy Metal Stress
Heavy metal stress phenotype for CNAG_06223T0
Cell Wall Stress
Cell wall stress phenotype for CNAG_06223T0
ER Stress
ER stress phenotype for CNAG_06223T0
Genotoxic Stress
Genotoxic stress phenotype for CNAG_06223T0
Antifungal Drug Susceptibility
Antifungal drug susceptibility for CNAG_06223T0
Virulence Data by the Insect Host Model (Galleria mellonella)
Galleria mellonella virulence data for CNAG_06223T0
Lung Infectivity Data by the Signature-tag Mutagenesis-based Murine Host Model
STM murine host model data for CNAG_06223T0