Transcription Factor Browser

Detailed locus information, expression profile, gene disruption strategy, and phenotype assay data.

Detailed Locus Information for CNAG_00670T0
Species Cryptococcus neoformans var. grubii H99
Gene Annotation hypothetical protein
Gene Symbol FZC12
TF Family Name Zn2Cys6 Classification based on Fungal Transcription Factor DB
KEGG Linkout  KEGG::CNA06480 
Genome Browser JBrowse link goes here. Sequence information also available from JBrowse.
Functional Annotation No functional annotation available.
Amino Acid Sequence MEDRPLSPRLYHLLIREQRSNESTGISLRPILTDGCGSRAFSGHNSAGLNTPLSPLSANPDLTASPHSQSQHGSIRRSVSPTSVSFHLSSEEIPTPNRRTNSILSLLNGPMSSSPPSFIGPSNSFTHKTEQDKYNHHRPNSPYPRPPPATFPITQHNQSTYFEERPCLPPTPGSIETYNPAPSSFPEFYPYHTPTAPYMTQAIDRPGIYRRHSSHPNEHHLLYPHLVPPSLHRHSTHHSSSATPSTSFNVPFPPPPPLTAYANGPYEPDFRVSGPRIPISRTTKACNSCRNRKVRCDAGAMNGGRAGEAPCTRCKEGNLECVYTNVQKKRGPCPGTARPAGSRSRRSSVQKQQQQTLIPQPPLPPSRPDSMGTDYGNHLDSVSPSQRSSIASIQTSIDVITPEETKFGHVGSYGFPFPPASSSALSQEYDWHATSKAAVAGNVPGWSGPQVGPRGSYSSAPWEGRR
Expression Data
Notation Condition Normalized Raw Expression
A YPD 30°C, concentration: 2x 10^8 cells/ml 450
B YPD 30°C, concentration: 5x10^7 cells/ml 379
C YPD 30°C, fluconazole treatment, concentration: 5x10^7 cells/ml 441
D YPD 30°C, SDS 0.01% treatment, concentration: 5x10^7 cells/ml 542
E YPD 37°C, concentration: 5x10^7 cells/ml 897
F YP+galactose 30°C, concentration: 2x10^8 cells/ml 578
Gene Disruption Strategy
Gene disruption strategy for CNAG_00670T0
Primer Name Description Primer Sequence
L1 5' flanking region primer 1 TGATGAAGATGCTGATGAGG
L2 5' flanking region primer 2 GCTCACTGGCCGTCGTTTTACTCATTTGGCGTCTCACTTAC
PO Southern blot probe primer GGATGAAAGGTGAAAGGACAC
R1 3' flanking region primer 1 CATGGTCATAGCTGTTTCCTGTGTGAAAGGGGAGTGATG
R2 3' flanking region primer 2 AGAATACATCGTGGTTGGC
SO diagnostic screening primer, pairing with B79 GGAAGTGTAGAGTCAGGAGATG
Phenotype Assays
Growth
Growth phenotype for CNAG_00670T0
Mating Data
Mating phenotype for CNAG_00670T0
Virulence Factor Production
Capsule
Capsule phenotype for CNAG_00670T0
Urease
Urease phenotype for CNAG_00670T0
Melanin
Melanin phenotype for CNAG_00670T0
Stress Response and Adaptation
Osmotic Stress
Osmotic stress phenotype for CNAG_00670T0
Oxidative Stress
Oxidative stress phenotype for CNAG_00670T0
Heavy Metal Stress
Heavy metal stress phenotype for CNAG_00670T0
Cell Wall Stress
Cell wall stress phenotype for CNAG_00670T0
ER Stress
ER stress phenotype for CNAG_00670T0
Genotoxic Stress
Genotoxic stress phenotype for CNAG_00670T0
Antifungal Drug Susceptibility
Antifungal drug susceptibility for CNAG_00670T0
Virulence Data by the Insect Host Model (Galleria mellonella)
Galleria mellonella virulence data for CNAG_00670T0
Lung Infectivity Data by the Signature-tag Mutagenesis-based Murine Host Model
STM murine host model data for CNAG_00670T0